Workshop 2 - Metabolic insecticide resistance and copy number variation

The lectures and notebooks from the second workshop of our training course in data analysis for genomic surveillance of African malaria vectors have been published on the course website.

This training workshop introduces the use of genomic data to analyse mutations in genes that cause metabolic resistance to insecticides. The workshop comprises four modules:

• Module 1 - Introduction to pandas DataFrames
• Module 2 - The genetic basis of metabolic resistance to insecticides in Anopheles mosquitoes
• Module 3 - Detecting CNVs from genome sequence data
• Module 4 - Analysing CNV frequencies at metabolic resistance genes