vobs updates

Technical and scientific updates from the Malaria Vector Genome Observatory.

22 July 2024 | data

Publication embargo early release for GAARD sample sets in Ag3.2

The following sample sets in the Ag3.2 dataset have been released from publication embargo today:

sample_set sample_count study_id release terms_of_use_expiry_date
1237-VO-BJ-DJOGBENOU-VMF00050 90 1237-VO-BJ-DJOGBENOU 3.2 2024-07-22
1237-VO-BJ-DJOGBENOU-VMF00067 142 1237-VO-BJ-DJOGBENOU 3.2 2024-07-22
1244-VO-GH-YAWSON-VMF00051 666 1244-VO-GH-YAWSON 3.2 2024-07-22
1245-VO-CI-CONSTANT-VMF00054 38 1245-VO-CI-CONSTANT 3.2 2024-07-22
1253-VO-TG-DJOGBENOU-VMF00052 179 1253-VO-TG-DJOGBENOU 3.2 2024-07-22

These sample sets all originate from the GAARD project and have been released from publication embargo following publication of results in Lucas et al. (2023).

The sample sets include samples from Benin, Togo, Ghana and Cote d'Ivoire. Here is a summary of the number of samples by location, year and taxon:

taxon coluzzii gambiae
sample_set country admin1_iso admin1_name year
1237-VO-BJ-DJOGBENOU-VMF00050 Benin BJ-OU Oueme 2017 90 0
1237-VO-BJ-DJOGBENOU-VMF00067 Benin BJ-DO Donga 2017 78 64
1244-VO-GH-YAWSON-VMF00051 Ghana GH-AA Greater Accra Region 2017 0 200
2018 268 0
GH-AH Ashanti Region 2017 0 198
1245-VO-CI-CONSTANT-VMF00054 Cote d'Ivoire CI-CM Comoe 2017 1 37
1253-VO-TG-DJOGBENOU-VMF00052 Togo TG-M Maritime Region 2017 0 179

For further information see the Ag3.2 docs.