Target-site genes

Below is a table of insecticide resistance candidate genes with information about any overlapping signals of selection.

Please note that the list of genes has been manually curated and is likely to be incomplete. If you would like to suggest an addition, please leave a comment at the bottom of the page.

Please also note that the fact that there are any signals of selection overlapping or adjacent to a given gene does not prove that the gene is under selection. Each signal of selection may span a number of genes, and the true target of selection may be a different gene nearby. Similarly, if a gene does not have any overlapping or adjacent signals of selection, that does not prove it is selectively neutral. There are a number of technical reasons why a true signal of selection might not be detected.

Gene Name Description Location No. signals (overlapping, adjacent) Known locus
AGAP006028 Rdl Gaba-gated chloride channel subunit 2L:25,363,652-25,434,556 13 (3, 10) Rdl
AGAP004707 para Voltage-gated sodium channel 2L:2,358,158-2,431,617 6 (5, 1) Vgsc
AGAP000801 GLURIIb Ionotropic receptor gluriib X:14,618,213-14,733,582 6 (4, 2)  
AGAP000803 GLURIIa Ionotropic receptor gluriia X:14,738,910-14,744,472 5 (4, 1)  
AGAP012975   Histamine-gated chloride channel subunit X:4,334,265-4,335,087 5 (2, 3)  
AGAP000798 GLURIIc Ionotropic receptor gluriic X:14,600,998-14,612,133 5 (2, 3)  
AGAP006027   Glutamate receptor, ionotropic , ampa 2L:25,272,296-25,314,781 3 (3, 0)  
AGAP007086   Sodium channel protein 2L:42,327,400-42,406,342 3 (3, 0)  
AGAP001356 ACE1 Acetylcholinesterase 2R:3,484,107-3,495,790 2 (2, 0) Ace1
AGAP006026     2L:25,174,728-25,195,703 2 (1, 1)  
AGAP004021 IR40a Ionotropic receptor ir40a 2R:47,922,057-47,924,574 1 (1, 0)  
AGAP004595 GPRGBB2 Putative gaba-b receptor 2 2R:58,230,212-58,238,127 1 (1, 0)  
AGAP010169     3R:49,859,628-49,870,902 1 (1, 0)  
AGAP028032     3R:49,878,991-49,880,259 1 (1, 0)  
AGAP004923 IR64a Ionotropic receptor ir64a 2L:6,087,277-6,104,141 0 (0, 0)  
AGAP004969 IR75d Ionotropic receptor ir75d 2L:7,301,876-7,303,528 0 (0, 0)  
AGAP005466 IR75l Ionotropic receptor ir75l 2L:15,949,821-15,952,169 0 (0, 0)  
AGAP005527 NMDAR3 Ionotropic receptor nmdar3 2L:16,639,642-16,647,151 0 (0, 0)  
AGAP005599   Ph-sensitive chloride channel 2L:17,708,774-17,740,450 0 (0, 0)  
AGAP006156 GPRMGL1 Putative metabotropic glutamate receptor 1 2L:27,308,590-27,323,533 0 (0, 0)  
AGAP007498 IR75k Ionotropic receptor ir75k 2L:46,923,249-46,925,420 0 (0, 0)  
AGAP007707     2L:49,147,256-49,148,967 0 (0, 0)  
AGAP001434   Glutamate receptor, anionic 2R:4,848,635-4,895,916 0 (0, 0)  
AGAP001478 NMDAR1 Ionotropic receptor nmdar1 2R:5,390,305-5,394,755 0 (0, 0)  
AGAP001811 IR75h.1 Ionotropic receptor ir75h.1 2R:10,851,535-10,853,577 0 (0, 0)  
AGAP001913   Histamine-gated chloride channel 2R:12,021,329-12,023,879 0 (0, 0)  
AGAP001990   Histamine-gated chloride channel subunit 2R:13,215,618-13,216,977 0 (0, 0)  
AGAP002152 alpha6 Nicotinic acetylcholine receptor subunit alpha 6 2R:16,511,319-16,522,978 0 (0, 0)  
AGAP013363 IR7i Ionotropic receptor ir7i 2R:26,793,376-26,795,314 0 (0, 0)  
AGAP013285 IR7u Ionotropic receptor ir7u 2R:26,795,525-26,797,440 0 (0, 0)  
AGAP002797 GLURIId Ionotropic receptor gluriid 2R:27,638,116-27,644,376 0 (0, 0)  
AGAP002904 IR41a Ionotropic receptor ir41a 2R:29,130,386-29,133,257 0 (0, 0)  
AGAP002971 alpha8 Nicotinic acetylcholine receptor subunit alpha 8 2R:30,267,141-30,294,999 0 (0, 0)  
AGAP002972 alpha2 Nicotinic acetylcholine receptor subunit alpha 2 2R:30,325,462-30,371,076 0 (0, 0)  
AGAP002974 alpha1 Nicotinic acetylcholine receptor subunit alpha 1 2R:30,465,345-30,478,828 0 (0, 0)  
AGAP012951 IR41c Ionotropic receptor ir41c 2R:39,202,960-39,205,176 0 (0, 0)  
AGAP003531 IR41n Ionotropic receptor ir41n 2R:39,207,749-39,210,030 0 (0, 0)  
AGAP004432 IR41t.1 Ionotropic receptor ir41t.1 2R:55,959,989-55,962,321 0 (0, 0)  
AGAP012969 IR41t.2 Ionotropic receptor ir41t.2 2R:55,988,209-55,990,472 0 (0, 0)  
AGAP010411 IR8a Ionotropic receptor ir8a 3L:2,867,458-2,870,025 0 (0, 0)  
AGAP010580     3L:6,474,643-6,477,162 0 (0, 0)  
AGAP010694   Glycine receptor alpha 1 subunit 3L:8,638,234-8,655,749 0 (0, 0)  
AGAP011349   Gaba-gated chloride channel 3L:21,584,469-21,612,837 0 (0, 0)  
AGAP011968 IR76b Ionotropic receptor ir76b 3L:35,687,053-35,690,662 0 (0, 0)  
AGAP007951 IR68a Ionotropic receptor ir68a 3R:3,275,939-3,278,326 0 (0, 0)  
AGAP008511 IR21a Ionotropic receptor ir21a 3R:11,468,382-11,471,590 0 (0, 0)  
AGAP008588 alpha5 Nicotinic acetylcholine receptor subunit alpha 5 3R:13,330,840-13,390,145 0 (0, 0)  
AGAP008759 IR41b Ionotropic receptor ir41b 3R:17,137,047-17,139,240 0 (0, 0)  
AGAP009014 IR31a Ionotropic receptor ir31a 3R:23,550,517-23,553,011 0 (0, 0)  
AGAP009158   Guanylate cyclase 3R:27,712,554-27,726,798 0 (0, 0)  
AGAP009493 alpha9 Nicotinic acetylcholine receptor subunit alpha 9 3R:34,721,510-34,725,375 0 (0, 0)  
AGAP009514 GPRGBB3 Putative gaba-b receptor 3 3R:35,049,851-35,054,224 0 (0, 0)  
AGAP010057   Nicotinic acetylcholine receptor, beta-2 subunit 3R:48,486,273-48,488,026 0 (0, 0)  
AGAP010059     3R:48,494,678-48,498,880 0 (0, 0)  
AGAP010205     3R:50,696,700-50,698,440 0 (0, 0)  
AGAP010272 IR25a Ionotropic receptor ir25a 3R:51,917,004-51,920,501 0 (0, 0)  
AGAP010281 GPRGBB1 Putative gaba-b receptor 1 3R:51,987,227-52,014,754 0 (0, 0)  
AGAP012429 NMDAR2 Ionotropic receptor nmdar2 UNKN:284,129-301,557 0 (0, 0)  
AGAP012447 GLURIIe Ionotropic receptor gluriie UNKN:1,553,917-1,557,262 0 (0, 0)  
AGAP012581     UNKN:17,437,539-17,438,715 0 (0, 0)  
AGAP012872     UNKN:35,447,753-35,448,867 0 (0, 0)  
AGAP000038   Gamma-aminobutyric acid receptor subunit beta X:481,140-483,518 0 (0, 0)  
AGAP000039   Gamma-aminobutyric acid receptor subunit alpha X:494,371-496,532 0 (0, 0)  
AGAP000138 alpha4 Nicotinic acetylcholine receptor subunit alpha 4 X:2,120,272-2,139,554 0 (0, 0)  
AGAP000256 IR93a Ionotropic receptor ir93a X:4,900,441-4,905,540 0 (0, 0)  
AGAP000329 alpha3 Nicotinic acetylcholine receptor subunit alpha 3 X:5,774,401-5,780,662 0 (0, 0)  
AGAP000466 ACE2 Acetylcholinesterase X:8,049,063-8,054,326 0 (0, 0)  
AGAP000962 alpha7 Nicotinic acetylcholine receptor subunit alpha 7 X:18,426,678-18,467,864 0 (0, 0)  
AGAP000966 beta1 Nicotinic acetylcholine receptor beta 1 X:18,557,873-18,559,842 0 (0, 0)  

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